Students - Biostat

STATISTICS FOR MOLECULAR BIOLOGY AND BIOINFORMATICS :
A computer intensive introductory course for graduate students

Feinberg Graduate School
Weizmann Institute of Science

Download :

	Course_Overview
	DNA_Case_Study
	STEPS_Case_Studies
	Understanding_Variability
	Basic_Models_of Probability
	Sampling_for_Estimation
	Computer_Intensive_Techniques
	Course_Syllabus
	Parametric_Statistical_Inference
	Variability_in_Several_Dimensions
	Design of Experiments
	Multiple Linear Regression
	STEPS_genes
	STEPS_eda1
	STEPS_eda2
	STEPS_base
	STEPS_Ige
	STEPS_lichen
	STEPS_medscrn
	Mini Project
	Statistics for Molecular Biology and Bioinformatics

THE COURSE TEXTBOOK AND DATA SETS

http://www.amazon.com/exec/obidos/ASIN/0534353703/kpaltd/103-5738669-5130200 http://www.duxbury.com/datasets/kenett/index.htm

STATISTICS RESOURCES

The Study of Stability in Variation: The UCLA Statistics on line textbook:
http://www.stat.ucla.edu/textbook/
Biomathematics and Statistics Scotland:
http://www.bioss.sari.ac.uk/bioss.htm
Explorapedia of Statistical and Mathematical Techniques
for use in Research and Technology:
http://www.bioss.sari.ac.uk/smart/unix/intro/slides/home.htm
SMART: FINDING UNUSUAL WORDS IN DNA SEQUENCES:
http://www.bioss.ac.uk/smart/unix/mrmes/slides/frames.htm
Statistical Training on the Web:
http://www.bioss.sari.ac.uk/~mike/webtra.htm
Statistics on the Web:
http://www.execpc.com/~helberg/statistics.html
Statistics Questions:
http://omega.albany.edu:8008/mat108dir/Problems/index.html
Statistics Multiple Choice Questions:
http://www.math.sfu.ca/stats/Courses/MultipleChoice/prob.normal.html
Statistics Education Links:
http://noppa5.pc.helsinki.fi/links.html
Vassar College Statistics Site:
http://faculty.vassar.edu/~lowry/VassarStats.html
Berkeley Statistics Site:
http://stat-www.berkeley.edu/users/stark/SticiGui/index.htm
Statistical Teaching Material:
http://www.utu.fi/yht/tilastotiede/statnet_links/links.html
Lewis Lab. University of Connecticut Applet Demonstrators:
http://lewis.eeb.uconn.edu/lewishome/software.html
Stanford Statistics Site:
http://www-stat.stanford.edu/~susan/surprise/

FREE SOFTWARE

A collection of links to demonstrators, course material,
textbooks and shareware software:
http://dorakmt.tripod.com/mtd/mathlink.html
A collection of Statistical Calculators:
http://www.stat.ucla.edu/calculators/

KEY ARTICLES

"The Statistics of Sequence Similarity Scores" -
An introduction to BLAST by Altschul:
http://www.ncbi.nlm.nih.gov/BLAST/tutorial/Altschul-1.html
"Jewish and Middle Eastern non-Jewish populations share a common
pool of Y-chromosome biallelic haplotypes" - Hammer et al - PNAS Online:
http://www.pnas.org/cgi/content/full/97/12/6769?maxtoshow=&HITS=10&hits=10&R ESULTFORMAT=&author1=Tamir&searchid=QID_NOT_SET&FIRSTINDEX=

USEFUL SITES

Home page of Shmuel Pietrokovski:
http://bioinformatics.weizmann.ac.il/~pietro/
National Center for Biotechnology Information:
http://www.ncbi.nlm.nih.gov/
National Library of Medicine:
http://www4.ncbi.nlm.nih.gov/htbin-post/Entrez/query?db=m&form=6&dopt=r&uid=9204283
BioMedNet:
http://journals.bmn.com/journals/list/browse?uid=JSTB.sb5308
BioPhysics 490 at the University of Illinois:
http://bioweb.ncsa.uiuc.edu/~bioph490/OLD/
Introduction to Bioinformatics Workshop at the University of Illinois:
http://bioweb.ncsa.uiuc.edu/~bioph490/workshop/
Bioinformatics at Stanford:
http://smi-web.stanford.edu/people/altman/bioinformatics.html
Bioinformatics at the Weizmann Institute:
http://bioinformatics.weizmann.ac.il/courses/
Bioinformatics Group of the ISREC
(Swiss Institute for Experimental Cancer Research):
http://www.isrec.isb-sib.ch/index.html